Publications

23 Papers

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Combining transcriptome and metabolome analysis to understand the response of sorghum to Melanaphis sacchari.

Zhao XR, Zhao DT, Zhang LY, Chang JH, Cui JH

Published: 11 June 2024 in BMC plant biology
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Pubmed ID: 38862926
DOI: 10.1186/s12870-024-05229-8

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Transcriptomic analysis of developing sorghum grains to detect genes related to cell wall biosynthesis and remodelling.

Costes C, Navarro Sanz S, Calatayud C, Soriano A, Mameri H, Terrier N, Francin-Allami M

Published: 24 January 2024 in BMC genomic data
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Pubmed ID: 38321382
DOI: 10.1186/s12863-024-01198-x

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[Transcriptome Analysis of Plant Growth-promoting Bacteria Alleviating Microplastic and Heavy Metal Combined Pollution Stress in Sorghum].

Liu YQ, Zhao SY, Ren XM, Li YY, Zhang YJ, Zhang H, Han H, Chen ZJ

Published: 13 January 2024 in Huan jing ke xue= Huanjing kexue
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Pubmed ID: 38216497
DOI: 10.13227/j.hjkx.202301158

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Time of day and genotype sensitivity adjust molecular responses to temperature stress in sorghum.

Bonnot T, Somayanda I, Jagadish SVK, Nagel DH

Published: 16 September 2023 in The Plant journal : for cell and molecular biology
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Pubmed ID: 37715988
DOI: 10.1111/tpj.16467

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Plant growth-promoting bacteria modulate gene expression and induce antioxidant tolerance to alleviate synergistic toxicity from combined microplastic and Cd pollution in sorghum.

Liu YQ, Chen Y, Ren XM, Li YY, Zhang YJ, Zhang H, Han H, Chen ZJ

Published: 11 September 2023 in Ecotoxicology and environmental safety
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Pubmed ID: 37690172
DOI: 10.1016/j.ecoenv.2023.115439

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Mucilage secretion by aerial roots in sorghum (Sorghum bicolor): sugar profile, genetic diversity, GWAS and transcriptomic analysis.

Xu S, Li XQ, Guo H, Wu XY, Wang N, Liu ZQ, Hao HQ, Jing HC

Published: 28 June 2023 in Plant molecular biology
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Pubmed ID: 37378835
DOI: 10.1007/s11103-023-01365-1

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Global Decrease in H3K9 Acetylation in Sorghum Seed Postgermination Stages.

Zhou H, Yuan Z, Han S, He H, Rong J, Guo D, Zhang Y, Zhang D, Liu X, Zhou C

Published: 31 March 2023 in Journal of agricultural and food chemistry
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Pubmed ID: 36994885
DOI: 10.1021/acs.jafc.2c08863

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A sorghum ascorbate peroxidase with four binding sites has activity against ascorbate and phenylpropanoids.

Zhang B, Lewis JA, Vermerris W, Sattler SE, Kang C

Published: 29 December 2022 in Plant physiology
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Pubmed ID: 36575825
DOI: 10.1093/plphys/kiac604

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Enhancing Mechanisms of the Plant Growth-Promoting Bacterial Strain Brevibacillus sp. SR-9 on Cadmium Enrichment in Sweet Sorghum by Metagenomic and Transcriptomic Analysis.

Li XQ, Liu YQ, Li YJ, Han H, Zhang H, Ji MF, Chen ZJ

Published: 12 December 2022 in International journal of environmental research and public health
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Pubmed ID: 36498382
DOI: 10.3390/ijerph192316309

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Mechanical stimulation reprograms the sorghum internode transcriptome and broadly alters hormone homeostasis.

Li Q, Zargar O, Park S, Pharr M, Muliana A, Finlayson SA

Published: 9 December 2022 in Plant science : an international journal of experimental plant biology
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Pubmed ID: 36481363
DOI: 10.1016/j.plantsci.2022.111555

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Identification of iron and zinc responsive genes in pearl millet using genome-wide RNA-sequencing approach.

Goud CA, Satturu V, Malipatil R, Viswanath A, Semalaiyappan J, Kudapa H, Rathod S, Rathore A, Govindaraj M, Thirunavukkarasu N

Published: 29 November 2022 in Frontiers in nutrition
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Pubmed ID: 36438771
DOI: 10.3389/fnut.2022.884381

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Bioenergy sorghum stem growth regulation: intercalary meristem localization, development, and gene regulatory network analysis.

Yu KMJ, Oliver J, McKinley B, Weers B, Fabich HT, Evetts N, Conradi MS, Altobelli SA, Marshall-Colon A, Mullet J

Published: 31 August 2022 in The Plant journal : for cell and molecular biology
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Pubmed ID: 36038985
DOI: 10.1111/tpj.15960

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Integrated metabolomics and transcriptomic analysis of the flavonoid regulatory networks in Sorghum bicolor seeds.

Zhou Y, Lv J, Yu Z, Wang Z, Li Y, Li M, Deng Z, Xu Q, Cui F, Zhou W

Published: 27 August 2022 in BMC genomics
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Pubmed ID: 36028813
DOI: 10.1186/s12864-022-08852-7

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Transcriptome Analysis Reveals Contrasting Plant Responses of Sorghum bicolor upon Colonization by Two Formae Speciales of Sporisorium reilianum.

Poloni A, Garde R, Dittiger LD, Heidrich T, Müller C, Drechsler F, Zhao Y, Mazumdar T, Schirawski J

Published: 27 August 2022 in International journal of molecular sciences
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Pubmed ID: 36012130
DOI: 10.3390/ijms23168864

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Multiomic analyses of two sorghum cultivars reveals the change of membrane lipids in their responses to water deficit.

Xu D, Ni Y, Zhang X, Guo Y

Published: 27 February 2022 in Plant physiology and biochemistry : PPB
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Pubmed ID: 35217329
DOI: 10.1016/j.plaphy.2022.02.015

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Differential Regulation of Maize and Sorghum Orthologs in Response to the Fungal Pathogen Exserohilum turcicum.

Adhikari P, Mideros SX, Jamann TM

Published: 12 June 2021 in Frontiers in plant science
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Pubmed ID: 34113371
DOI: 10.3389/fpls.2021.675208

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Transcriptome Analysis of Drought-Resistant and Drought-Sensitive Sorghum (Sorghum bicolor) Genotypes in Response to PEG-Induced Drought Stress.

Abdel-Ghany SE, Ullah F, Ben-Hur A, Reddy ASN

Published: 30 January 2020 in International journal of molecular sciences
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Pubmed ID: 31991584
DOI: 10.3390/ijms21030772

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Sorghum Dw2 Encodes a Protein Kinase Regulator of Stem Internode Length.

Hilley JL, Weers BD, Truong SK, McCormick RF, Mattison AJ, McKinley BA, Morishige DT, Mullet JE

Published: 6 July 2017 in Scientific reports
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Pubmed ID: 28676627
DOI: 10.1038/s41598-017-04609-5

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Dynamics of gene expression during development and expansion of vegetative stem internodes of bioenergy sorghum.

Kebrom TH, McKinley B, Mullet JE

Published: 27 June 2017 in Biotechnology for biofuels
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Pubmed ID: 28649278
DOI: 10.1186/s13068-017-0848-3

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DNA methylation and gene expression regulation associated with vascularization in Sorghum bicolor.

Turco GM, Kajala K, Kunde-Ramamoorthy G, Ngan CY, Olson A, Deshphande S, Tolkunov D, Waring B, Stelpflug S, Klein P, Schmutz J, Kaeppler S, Ware D, Wei CL, Etchells JP, Brady SM

Published: 12 February 2017 in The New phytologist
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Pubmed ID: 28186631
DOI: 10.1111/nph.14448

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Genetic dissection of sorghum grain quality traits using diverse and segregating populations.

Boyles RE, Pfeiffer BK, Cooper EA, Rauh BL, Zielinski KJ, Myers MT, Brenton Z, Rooney WL, Kresovich S

Published: 29 December 2016 in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik
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Pubmed ID: 28028582
DOI: 10.1007/s00122-016-2844-6

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Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.

Cheng CY, Krishnakumar V, Chan AP, Thibaud-Nissen F, Schobel S, Town CD

Published: 20 November 2016 in The Plant journal : for cell and molecular biology
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Pubmed ID: 27862469
DOI: 10.1111/tpj.13415

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Identification of novel drought-responsive microRNAs and trans-acting siRNAs from Sorghum bicolor (L.) Moench by high-throughput sequencing analysis.

Katiyar A, Smita S, Muthusamy SK, Chinnusamy V, Pandey DM, Bansal KC

Published: 4 August 2015 in Frontiers in plant science
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Pubmed ID: 26236318
DOI: 10.3389/fpls.2015.00506

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