SorghumBase - Publications

107 Papers

Keywords

Sorghum bicolor (107)
gene expression (7)
abiotic stress (7)
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flavonoid (4)
metabolomics (4)
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polyphenols (3)
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specialized metabolite (2)
phytoremediation (2)
water stress (2)
sorghum (2)
salt stress (2)
genomic prediction (2)
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quantitative trait loci (2)
mass spectrometry (2)
cytochrome P450 (2)
Melanaphis sacchari (2)
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cuticular wax (2)
allelochemical (2)
expression atlas (1)
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mini core (1)
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monocot (1)
brassinosteroids (1)
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A cytochrome P450 CYP71 enzyme expressed in Sorghum bicolor root hair cells participates in the biosynthesis of the benzoquinone allelochemical sorgoleone.

Pan Z, Baerson SR, Wang M, Bajsa-Hirschel J, Rimando AM, Wang X, Nanayakkara NPD, Noonan BP, Fromm ME, Dayan FE, Khan IA, Duke SO

Published: 21 February 2018 in The New phytologist

Keywords:

allelochemical

Sorghum bicolor

sorgoleone

Pubmed ID: 29461628

DOI: 10.1111/nph.15037

Details

The Sorghum bicolor reference genome: improved assembly, gene annotations, a transcriptome atlas, and signatures of genome organization.

McCormick RF, Truong SK, Sreedasyam A, Jenkins J, Shu S, Sims D, Kennedy M, Amirebrahimi M, Weers BD, McKinley B, Mattison A, Morishige DT, Grimwood J, Schmutz J, Mullet JE

Published: 14 November 2017 in The Plant journal : for cell and molecular biology

Keywords:

genetic variation

genome assembly

Sorghum bicolor

Pubmed ID: 29161754.

DOI: 10.1111/tpj.13781

Details

Impact of Novel Sorghum Bran Diets on DSS-Induced Colitis.

Ritchie LE, Taddeo SS, Weeks BR, Carroll RJ, Dykes L, Rooney LW, Turner ND

Published: 28 March 2017 in Nutrients

Keywords:

gene expression

polyphenols

Sorghum bicolor

Pubmed ID: 28346392

DOI: 10.3390/nu9040330

Details

Genomic characterization of a core set of the USDA-NPGS Ethiopian sorghum germplasm collection: implications for germplasm conservation, evaluation, and utilization in crop improvement.

Cuevas HE, Rosa-Valentin G, Hayes CM, Rooney WL, Hoffmann L

Published: 28 January 2017 in BMC genomics

Keywords:

Genome-wide association study

Genotyping-by-sequencing

Population structure

Sorghum bicolor

Pubmed ID: 28125967

DOI: 10.1186/s12864-016-3475-7

Details

Drought stress tolerance strategies revealed by RNA-Seq in two sorghum genotypes with contrasting WUE.

Fracasso A, Trindade LM, Amaducci S

Published: 23 May 2016 in BMC plant biology

Keywords:

Drought stress

Drought tolerance

RNA-Seq

Sorghum bicolor

Water Use Efficiency

Pubmed ID: 27208977

DOI: 10.1186/s12870-016-0800-x

Details

Evaluation of Sorghum [Sorghum bicolor (L.)] Reference Genes in Various Tissues and under Abiotic Stress Conditions for Quantitative Real-Time PCR Data Normalization.

Sudhakar Reddy P, Srinivas Reddy D, Sivasakthi K, Bhatnagar-Mathur P, Vadez V, Sharma KK

Published: 21 May 2016 in Frontiers in plant science

Keywords:

Sorghum bicolor

Pubmed ID: 27200008

DOI: 10.3389/fpls.2016.00529

Details

Publications

107 Papers

Keywords

A cytochrome P450 CYP71 enzyme expressed in Sorghum bicolor root hair cells participates in the biosynthesis of the benzoquinone allelochemical sorgoleone.

Published: 21 February 2018 in The New phytologist

Keywords:

allelochemical

Sorghum bicolor

sorgoleone

Pubmed ID: 29461628

DOI: 10.1111/nph.15037

The Sorghum bicolor reference genome: improved assembly, gene annotations, a transcriptome atlas, and signatures of genome organization.

Published: 14 November 2017 in The Plant journal : for cell and molecular biology

Keywords:

genetic variation

genome assembly

Sorghum bicolor

Pubmed ID: 29161754.

DOI: 10.1111/tpj.13781

Impact of Novel Sorghum Bran Diets on DSS-Induced Colitis.

Published: 28 March 2017 in Nutrients

Keywords:

gene expression

polyphenols

Sorghum bicolor

Pubmed ID: 28346392

DOI: 10.3390/nu9040330

Genomic characterization of a core set of the USDA-NPGS Ethiopian sorghum germplasm collection: implications for germplasm conservation, evaluation, and utilization in crop improvement.

Published: 28 January 2017 in BMC genomics

Keywords:

Genome-wide association study

Genotyping-by-sequencing

Population structure

Sorghum bicolor

Pubmed ID: 28125967

DOI: 10.1186/s12864-016-3475-7

Drought stress tolerance strategies revealed by RNA-Seq in two sorghum genotypes with contrasting WUE.

Published: 23 May 2016 in BMC plant biology

Keywords:

Drought stress

Drought tolerance

RNA-Seq

Sorghum bicolor

Water Use Efficiency

Pubmed ID: 27208977

DOI: 10.1186/s12870-016-0800-x

Evaluation of Sorghum [Sorghum bicolor (L.)] Reference Genes in Various Tissues and under Abiotic Stress Conditions for Quantitative Real-Time PCR Data Normalization.

Published: 21 May 2016 in Frontiers in plant science

Keywords:

Sorghum bicolor

Pubmed ID: 27200008

DOI: 10.3389/fpls.2016.00529

Genome-wide association study of grain polyphenol concentrations in global sorghum [Sorghum bicolor (L.) Moench] germplasm.

Published: 12 November 2014 in Journal of agricultural and food chemistry

Keywords:

3-deoxyanthocyanidin

flavonoid

GWAS

QTL

Sorghum bicolor

Pubmed ID: 25272193

DOI: 10.1021/jf503651t

Publications

107 Papers

Keywords

A cytochrome P450 CYP71 enzyme expressed in Sorghum bicolor root hair cells participates in the biosynthesis of the benzoquinone allelochemical sorgoleone.

Published: 21 February 2018 in The New phytologist

Keywords: allelochemical Sorghum bicolor sorgoleone

Pubmed ID: 29461628

DOI: 10.1111/nph.15037

The Sorghum bicolor reference genome: improved assembly, gene annotations, a transcriptome atlas, and signatures of genome organization.

Published: 14 November 2017 in The Plant journal : for cell and molecular biology

Keywords: genetic variation genome assembly Sorghum bicolor

Pubmed ID: 29161754.

DOI: 10.1111/tpj.13781

Impact of Novel Sorghum Bran Diets on DSS-Induced Colitis.

Published: 28 March 2017 in Nutrients

Keywords: gene expression polyphenols Sorghum bicolor

Pubmed ID: 28346392

DOI: 10.3390/nu9040330

Genomic characterization of a core set of the USDA-NPGS Ethiopian sorghum germplasm collection: implications for germplasm conservation, evaluation, and utilization in crop improvement.

Published: 28 January 2017 in BMC genomics

Keywords: Genome-wide association study Genotyping-by-sequencing Population structure Sorghum bicolor

Pubmed ID: 28125967

DOI: 10.1186/s12864-016-3475-7

Drought stress tolerance strategies revealed by RNA-Seq in two sorghum genotypes with contrasting WUE.

Published: 23 May 2016 in BMC plant biology

Keywords: Drought stress Drought tolerance RNA-Seq Sorghum bicolor Water Use Efficiency

Pubmed ID: 27208977

DOI: 10.1186/s12870-016-0800-x

Evaluation of Sorghum [Sorghum bicolor (L.)] Reference Genes in Various Tissues and under Abiotic Stress Conditions for Quantitative Real-Time PCR Data Normalization.

Published: 21 May 2016 in Frontiers in plant science

Keywords: Sorghum bicolor

Pubmed ID: 27200008

DOI: 10.3389/fpls.2016.00529

Genome-wide association study of grain polyphenol concentrations in global sorghum [Sorghum bicolor (L.) Moench] germplasm.

Published: 12 November 2014 in Journal of agricultural and food chemistry

Keywords: 3-deoxyanthocyanidin flavonoid GWAS QTL Sorghum bicolor

Pubmed ID: 25272193

DOI: 10.1021/jf503651t

Keywords:

allelochemical

Sorghum bicolor

sorgoleone

Keywords:

genetic variation

genome assembly

Sorghum bicolor

Keywords:

gene expression

polyphenols

Sorghum bicolor

Keywords:

Genome-wide association study

Genotyping-by-sequencing

Population structure

Sorghum bicolor

Keywords:

Drought stress

Drought tolerance

RNA-Seq

Sorghum bicolor

Water Use Efficiency

Keywords:

Sorghum bicolor

Keywords:

3-deoxyanthocyanidin

flavonoid

GWAS

QTL

Sorghum bicolor