Publications

295 Papers

Keywords

  • show more

Genome-Wide Association Mapping Identifies Novel Panicle Morphology Loci and Candidate Genes in Sorghum.

Wang L, Upadhyaya HD, Zheng J, Liu Y, Singh SK, Gowda CLL, Kumar R, Zhu Y, Wang YH, Li J

Published: 23 October 2021 in Frontiers in plant science
Keywords:
Pubmed ID: 34675951
DOI: 10.3389/fpls.2021.743838

Details

Sorghum Pan-Genome Explores the Functional Utility for Genomic-Assisted Breeding to Accelerate the Genetic Gain.

Ruperao P, Thirunavukkarasu N, Gandham P, Selvanayagam S, Govindaraj M, Nebie B, Manyasa E, Gupta R, Das RR, Odeny DA, Gandhi H, Edwards D, Deshpande SP, Rathore A

Published: 19 June 2021 in Frontiers in plant science
Keywords:
Pubmed ID: 34140962
DOI: 10.3389/fpls.2021.666342

Details

Deciphering Reserve Mobilization, Antioxidant Potential, and Expression Analysis of Starch Synthesis in Sorghum Seedlings under Salt Stress.

Punia H, Tokas J, Mor VS, Bhuker A, Malik A, Singh N, Alsahli AA, Hefft DI

Published: 28 November 2021 in Plants (Basel, Switzerland)
Keywords:
Pubmed ID: 34834826
DOI: 10.3390/plants10112463

Details

Dissection of canopy layer-specific genetic control of leaf angle in Sorghum bicolor by RNA sequencing.

Natukunda MI, Mantilla-Perez MB, Graham MA, Liu P, Salas-Fernandez MG

Published: 5 February 2022 in BMC genomics
Keywords:
Pubmed ID: 35114939
DOI: 10.1186/s12864-021-08251-4

Details

Evaluation of Cell Wall Chemistry of Della and Its Mutant Sweet Sorghum Stalks.

Mengistie E, Alayat AM, Sotoudehnia F, Bokros N, DeBolt S, McDonald AG

Published: 1 February 2022 in Journal of agricultural and food chemistry
Keywords:
Pubmed ID: 35099962
DOI: 10.1021/acs.jafc.1c07176

Details

Identification of Candidate Forage Yield Genes in Sorghum (Sorghum bicolor L.) Using Integrated Genome-Wide Association Studies and RNA-Seq.

Wang L, Liu Y, Gao L, Yang X, Zhang X, Xie S, Chen M, Wang YH, Li J, Shen Y

Published: 29 January 2022 in Frontiers in plant science
Keywords:
Pubmed ID: 35087554
DOI: 10.3389/fpls.2021.788433

Details

Transcript profiles of wild and domesticated sorghum under water-stressed conditions and the differential impact on dhurrin metabolism.

Ananda GKS, Norton SL, Blomstedt C, Furtado A, Møller BL, Gleadow R, Henry RJ

Published: 28 January 2022 in Planta
Keywords:
Pubmed ID: 35084593
DOI: 10.1007/s00425-022-03831-4

Details

Concentration of Pro-Health Compound of Sorghum Grain-Based Foods.

Frankowski J, Przybylska-Balcerek A, Stuper-Szablewska K

Published: 22 January 2022 in Foods (Basel, Switzerland)
Keywords:
Pubmed ID: 35053948
DOI: 10.3390/foods11020216

Details

Genetic control of source-sink relationships in grain sorghum.

Chiluwal A, Perumal R, Poudel HP, Muleta K, Ostmeyer T, Fedenia L, Pokharel M, Bean SR, Sebela D, Bheemanahalli R, Oumarou H, Klein P, Rooney WL, Jagadish SVK

Published: 18 January 2022 in Planta
Keywords:
Pubmed ID: 35038036
DOI: 10.1007/s00425-022-03822-5

Details

PlantNexus: A Gene Co-expression Network Database and Visualization Tool for Barley and Sorghum.

Zhou Y, Sukul A, Mishler-Elmore JW, Faik A, Held MA

Published: 14 January 2022 in Plant & cell physiology
Keywords:
Pubmed ID: 35024864
DOI: 10.1093/pcp/pcac007

Details

SorghumBase: a web-based portal for sorghum genetic information and community advancement.

Gladman N, Olson A, Wei S, Chougule K, Lu Z, Tello-Ruiz M, Meijs I, Van Buren P, Jiao Y, Wang B, Kumar V, Kumari S, Zhang L, Burke J, Chen J, Burow G, Hayes C, Emendack Y, Xin Z, Ware D

Published: 12 January 2022 in Planta
Keywords:
Pubmed ID: 35015132
DOI: 10.1007/s00425-022-03821-6

Details

Sorghum in dryland: morphological, physiological, and molecular responses of sorghum under drought stress.

Abreha KB, Enyew M, Carlsson AS, Vetukuri RR, Feyissa T, Motlhaodi T, Ng'uni D, Geleta M

Published: 12 December 2021 in Planta
Keywords:
Pubmed ID: 34894286
DOI: 10.1007/s00425-021-03799-7

Details

Identification of Sorghum (Sorghum bicolor (L.) Moench) Genotypes with Potential for Hydric and Heat Stress Tolerance in Northeastern Mexico.

Galicia-Juárez M, Zavala-García F, Sinagawa-García SR, Gutiérrez-Diez A, Williams-Alanís H, Cisneros-López ME, Valle-Gough RE, Flores-Garivay R, Santillano-Cázares J

Published: 28 November 2021 in Plants (Basel, Switzerland)
Keywords:
Pubmed ID: 34834628
DOI: 10.3390/plants10112265

Details

Morphogene-assisted transformation of Sorghum bicolor allows more efficient genome editing.

Aregawi K, Shen J, Pierroz G, Sharma MK, Dahlberg J, Owiti J, Lemaux PG

Published: 28 November 2021 in Plant biotechnology journal
Keywords:
Pubmed ID: 34837319
DOI: 10.1111/pbi.13754

Details

Overexpression of the rice BAHD acyltransferase AT10 increases xylan-bound p-coumarate and reduces lignin in Sorghum bicolor.

Tian Y, Lin CY, Park JH, Wu CY, Kakumanu R, Pidatala VR, Vuu KM, Rodriguez A, Shih PM, Baidoo EEK, Temple S, Simmons BA, Gladden JM, Scheller HV, Eudes A

Published: 22 November 2021 in Biotechnology for biofuels
Keywords:
Pubmed ID: 34801067
DOI: 10.1186/s13068-021-02068-9

Details

Dissecting the genetic control of natural variation in sorghum photosynthetic response to drought stress.

Ortiz D, Salas-Fernandez MG

Published: 19 November 2021 in Journal of experimental botany
Keywords:
Pubmed ID: 34791180
DOI: 10.1093/jxb/erab502

Details

Genetic control of leaf angle in sorghum and its effect on light interception.

Zhi X, Tao Y, Jordan D, Borrell A, Hunt C, Cruickshank A, Potgieter A, Wu A, Hammer G, George-Jaeggli B, Mace E

Published: 27 October 2021 in Journal of experimental botany
Keywords:
Pubmed ID: 34698817
DOI: 10.1093/jxb/erab467

Details

Genome-Wide Transcriptome Profiling, Characterization, and Functional Identification of NAC Transcription Factors in Sorghum under Salt Stress.

Punia H, Tokas J, Malik A, Sangwan S, Rani A, Yashveer S, Alansi S, Hashim MJ, El-Sheikh MA

Published: 24 October 2021 in Antioxidants (Basel, Switzerland)
Keywords:
Pubmed ID: 34679740
DOI: 10.3390/antiox10101605

Details

Large-Scale Non-Targeted Metabolomics Reveals Antioxidant, Nutraceutical and Therapeutic Potentials of Sorghum.

Ramalingam AP, Mohanavel W, Premnath A, Muthurajan R, Prasad PVV, Perumal R

Published: 24 October 2021 in Antioxidants (Basel, Switzerland)
Keywords:
Pubmed ID: 34679645
DOI: 10.3390/antiox10101511

Details

Comparative physiological and transcriptomic analysis reveals salinity tolerance mechanisms in Sorghum bicolor (L.) Moench.

Ukwatta J, Pabuayon ICM, Park J, Chen J, Chai X, Zhang H, Zhu JK, Xin Z, Shi H

Published: 18 October 2021 in Planta
Keywords:
Pubmed ID: 34657208
DOI: 10.1007/s00425-021-03750-w

Details

Improving abiotic stress tolerance in sorghum: focus on the nutrient transporters and marker-assisted breeding.

Maharajan T, Krishna TPA, Kiriyanthan RM, Ignacimuthu S, Ceasar SA

Published: 6 October 2021 in Planta
Keywords:
Pubmed ID: 34609619
DOI: 10.1007/s00425-021-03739-5

Details

Identification of the Tyrosine- and Phenylalanine-Derived Soluble Metabolomes of Sorghum.

Simpson JP, Olson J, Dilkes B, Chapple C

Published: 2 October 2021 in Frontiers in plant science
Keywords:
Pubmed ID: 34594350
DOI: 10.3389/fpls.2021.714164

Details

Current status and prospects of herbicide-resistant grain sorghum (Sorghum bicolor).

Pandian BA, Sexton-Bowser S, Prasad PV, Jugulam M

Published: 18 September 2021 in Pest management science
Keywords:
Pubmed ID: 34532972
DOI: 10.1002/ps.6644

Details

RNA-Sequencing in Resistant (QL3) and Susceptible (Theis) Sorghum Cultivars Inoculated With Johnsongrass Isolates of Colletotrichum sublineola.

Natarajan P, Ahn E, Reddy UK, Perumal R, Prom LK, Magill C

Published: 31 August 2021 in Frontiers in genetics
Keywords:
Pubmed ID: 34456979
DOI: 10.3389/fgene.2021.722519

Details

Evolutionary innovations driving abiotic stress tolerance in C4 grasses and cereals.

Pardo J, VanBuren R

Published: 14 August 2021 in The Plant cell
Keywords:
Pubmed ID: 34387354
DOI: 10.1093/plcell/koab205

Details

Sorghum’s Whole-Plant Transcriptome and Proteome Responses to Drought Stress: A Review.

Ngara R, Goche T, Swanevelder DZH, Chivasa S

Published: 7 August 2021 in Life (Basel, Switzerland)
Keywords:
Pubmed ID: 34357076
DOI: 10.3390/life11070704

Details

Comparative Transcriptome Analysis Reveals Genetic Mechanisms of Sugarcane Aphid Resistance in Grain Sorghum.

Serba DD, Meng X, Schnable J, Bashir E, Michaud JP, Vara Prasad PV, Perumal R

Published: 21 July 2021 in International journal of molecular sciences
Keywords:
Pubmed ID: 34281180
DOI: 10.3390/ijms22137129

Details

Biochemical composition of selected lines from sorghum (Sorghum bicolor L.) landraces.

Kardeş YM, Kaplan M, Kale H, Yılmaz MF, Karaman K, Temizgül R, Akar T

Published: 7 July 2021 in Planta
Keywords:
Pubmed ID: 34228194
DOI: 10.1007/s00425-021-03670-9

Details

Sorghum under saline conditions: responses, tolerance mechanisms, and management strategies.

Mansour MMF, Emam MM, Salama KHA, Morsy AA

Published: 6 July 2021 in Planta
Keywords:
Pubmed ID: 34224010
DOI: 10.1007/s00425-021-03671-8

Details

Meta-analysis identifies pleiotropic loci controlling phenotypic trade-offs in sorghum.

Mural RV, Grzybowski M, Miao C, Damke A, Sapkota S, Boyles RE, Salas Fernandez MG, Schnable PS, Sigmon B, Kresovich S, Schnable JC

Published: 9 June 2021 in Genetics
Keywords:
Pubmed ID: 34100945
DOI: 10.1093/genetics/iyab087

Details

Sorghum Phenolic Compounds Are Associated with Cell Growth Inhibition through Cell Cycle Arrest and Apoptosis in Human Hepatocarcinoma and Colorectal Adenocarcinoma Cells.

Chen X, Shen J, Xu J, Herald T, Smolensky D, Perumal R, Wang W

Published: 3 June 2021 in Foods (Basel, Switzerland)
Keywords:
Pubmed ID: 34062914
DOI: 10.3390/foods10050993

Details

Genomic patterns of structural variation among diverse genotypes of Sorghum bicolor and a potential role for deletions in local adaptation.

Songsomboon K, Brenton Z, Heuser J, Kresovich S, Shakoor N, Mockler T, Cooper EA

Published: 6 May 2021 in G3 (Bethesda, Md.)
Keywords:
Pubmed ID: 33950177
DOI: 10.1093/g3journal/jkab154

Details

Transcriptome sequencing revealed the mechanism of promoting floret opening by exogenous methyl jasmonate in sorghum.

Liu S, He Y, Fu Y, Zeng X

Published: 1 May 2021 in 3 Biotech
Keywords:
Pubmed ID: 33927972
DOI: 10.1007/s13205-021-02743-6

Details

Sorghum mitigates climate variability and change on crop yield and quality.

Chadalavada K, Kumari BDR, Kumar TS

Published: 1 May 2021 in Planta
Keywords:
Pubmed ID: 33928417
DOI: 10.1007/s00425-021-03631-2

Details

B Chromosomes in Genus Sorghum (Poaceae).

Bednářová M, Karafiátová M, Hřibová E, Bartoš J

Published: 4 April 2021 in Plants (Basel, Switzerland)
Keywords:
Pubmed ID: 33803087
DOI: 10.3390/plants10030505

Details

Differential responses of sorghum genotypes to drought stress revealed by physio-chemical and transcriptional analysis.

Rajarajan K, Ganesamurthy K, Raveendran M, Jeyakumar P, Yuvaraja A, Sampath P, Prathima PT, Senthilraja C

Published: 24 March 2021 in Molecular biology reports
Keywords:
Pubmed ID: 33755850
DOI: 10.1007/s11033-021-06279-z

Details

The Sorghum bicolor Root Exudate Sorgoleone Shapes Bacterial Communities and Delays Network Formation.

Wang P, Chai YN, Roston R, Dayan FE, Schachtman DP

Published: 18 March 2021 in mSystems
Keywords:
Pubmed ID: 33727394
DOI: 10.1128/mSystems.00749-20

Details

Genome-wide identification and classification of Lipoxygenase gene family and their roles in sorghum-aphid interaction.

Shrestha K, Pant S, Huang Y

Published: 3 January 2021 in Plant molecular biology
Keywords:
Pubmed ID: 33387173
DOI: 10.1007/s11103-020-01107-7

Details

Distinct Preflowering Drought Tolerance Strategies of Sorghum bicolor Genotype RTx430 Revealed by Subcellular Protein Profiling.

Ogden AJ, Abdali S, Engbrecht KM, Zhou M, Handakumbura PP

Published: 24 December 2020 in International journal of molecular sciences
Keywords:
Pubmed ID: 33352693
DOI: 10.3390/ijms21249706

Details

A Comparative Study on Phenolic Content, Antioxidant Activity and Anti-Inflammatory Capacity of Aqueous and Ethanolic Extracts of Sorghum in Lipopolysaccharide-Induced RAW 264.7 Macrophages.

Hong S, Pangloli P, Perumal R, Cox S, Noronha LE, Dia VP, Smolensky D

Published: 24 December 2020 in Antioxidants (Basel, Switzerland)
Keywords:
Pubmed ID: 33353009
DOI: 10.3390/antiox9121297

Details

Identification of Novel Genomic Associations and Gene Candidates for Grain Starch Content in Sorghum.

Sapkota S, Boatwright JL, Jordan K, Boyles R, Kresovich S

Published: 6 December 2020 in Genes
Keywords:
Pubmed ID: 33276449
DOI: 10.3390/genes11121448

Details

Elevated production of reactive oxygen species is related to host plant resistance to sugarcane aphid in sorghum.

Pant S, Huang Y

Published: 4 December 2020 in Plant signaling & behavior
Keywords:
Pubmed ID: 33270502
DOI: 10.1080/15592324.2020.1849523

Details

Profiling Alternative 3′ Untranslated Regions in Sorghum using RNA-seq Data.

Tu M, Li Y

Published: 17 November 2020 in Frontiers in genetics
Keywords:
Pubmed ID: 33193635
DOI: 10.3389/fgene.2020.556749

Details

Voxel carving-based 3D reconstruction of sorghum identifies genetic determinants of light interception efficiency.

Gaillard M, Miao C, Schnable JC, Benes B

Published: 20 October 2020 in Plant direct
Keywords:
Pubmed ID: 33073164
DOI: 10.1002/pld3.255

Details

DnaJs, the critical drivers of Hsp70s: genome-wide screening, characterization and expression of DnaJ family genes in Sorghum bicolor.

Nagaraju M, Kumar A, Rajasheker G, Manohar Rao D, Kavi Kishor PB

Published: 4 September 2020 in Molecular biology reports
Keywords:
Pubmed ID: 32880065
DOI: 10.1007/s11033-020-05793-w

Details

On the structure and function of Sorghum bicolor CHIP (carboxyl terminus of Hsc70-interacting protein): A link between chaperone and proteasome systems.

Gonçalves CC, Pinheiro GMS, Dahlström KM, Souto DEP, Kubota LT, Barbosa LRS, Ramos CHI

Published: 17 June 2020 in Plant science : an international journal of experimental plant biology
Keywords:
Pubmed ID: 32540021
DOI: 10.1016/j.plantsci.2020.110506

Details

Use of CRISPR/Cas9 for Targeted Mutagenesis in Sorghum.

Char SN, Lee H, Yang B

Published: 6 June 2020 in Current protocols in plant biology
Keywords:
Pubmed ID: 32501639
DOI: 10.1002/cppb.20112

Details

RAD-seq-Based High-Density Linkage Map Construction and QTL Mapping of Biomass-Related Traits in Sorghum using the Japanese Landrace Takakibi NOG.

Kajiya-Kanegae H, Takanashi H, Fujimoto M, Ishimori M, Ohnishi N, Wacera WF, Omollo EA, Kobayashi M, Yano K, Nakano M, Kozuka T, Kusaba M, Iwata H, Tsutsumi N, Sakamoto W

Published: 1 May 2020 in Plant & cell physiology
Keywords:
Pubmed ID: 32353144
DOI: 10.1093/pcp/pcaa056

Details

Transcriptome analysis of drought-tolerant sorghum genotype SC56 in response to water stress reveals an oxidative stress defense strategy.

Azzouz-Olden F, Hunt AG, Dinkins R

Published: 19 April 2020 in Molecular biology reports
Keywords:
Pubmed ID: 32303956
DOI: 10.1007/s11033-020-05396-5

Details

Consumer Acceptance and Willingness to Pay for Instant Cereal Products With Food-to-Food Fortification in Eldoret, Kenya.

De Groote H, Mugalavai V, Ferruzzi M, Onkware A, Ayua E, Duodu KG, Ndegwa M, Hamaker BR

Published: 17 March 2020 in Food and nutrition bulletin
Keywords:
Pubmed ID: 32174149
DOI: 10.1177/0379572119876848

Details

Drought delays development of the sorghum root microbiome and enriches for monoderm bacteria.

Xu L, Naylor D, Dong Z, Simmons T, Pierroz G, Hixson KK, Kim YM, Zink EM, Engbrecht KM, Wang Y, Gao C, DeGraaf S, Madera MA, Sievert JA, Hollingsworth J, Birdseye D, Scheller HV, Hutmacher R, Dahlberg J, Jansson C, Taylor JW, Lemaux PG, Coleman-Derr D

Published: 19 April 2018 in Proceedings of the National Academy of Sciences of the United States of America
Keywords:
Pubmed ID: 29666229
DOI: 10.1073/pnas.1717308115

Details

Metabolomics of sorghum roots during nitrogen stress reveals compromised metabolic capacity for salicylic acid biosynthesis.

Sheflin AM, Chiniquy D, Yuan C, Goren E, Kumar I, Braud M, Brutnell T, Eveland AL, Tringe S, Liu P, Kresovich S, Marsh EL, Schachtman DP, Prenni JE

Published: 28 June 2019 in Plant direct
Keywords:
Pubmed ID: 31245765
DOI: 10.1002/pld3.122

Details

A new reference genome for Sorghum bicolor reveals high levels of sequence similarity between sweet and grain genotypes: implications for the genetics of sugar metabolism.

Cooper EA, Brenton ZW, Flinn BS, Jenkins J, Shu S, Flowers D, Luo F, Wang Y, Xia P, Barry K, Daum C, Lipzen A, Yoshinaga Y, Schmutz J, Saski C, Vermerris W, Kresovich S

Published: 28 May 2019 in BMC genomics
Keywords:
Pubmed ID: 31133004
DOI: 10.1186/s12864-019-5734-x

Details

Conserved defense responses between maize and sorghum to Exserohilum turcicum.

Zhang X, Fernandes SB, Kaiser C, Adhikari P, Brown PJ, Mideros SX, Jamann TM

Published: 12 February 2020 in BMC plant biology
Keywords:
Pubmed ID: 32041528
DOI: 10.1186/s12870-020-2275-z

Details

Genome-wide association study reveals that different pathways contribute to grain quality variation in sorghum (Sorghum bicolor).

Kimani W, Zhang LM, Wu XY, Hao HQ, Jing HC

Published: 2 February 2020 in BMC genomics
Keywords:
Pubmed ID: 32005168
DOI: 10.1186/s12864-020-6538-8

Details

Transcriptome Analysis of Drought-Resistant and Drought-Sensitive Sorghum (Sorghum bicolor) Genotypes in Response to PEG-Induced Drought Stress.

Abdel-Ghany SE, Ullah F, Ben-Hur A, Reddy ASN

Published: 30 January 2020 in International journal of molecular sciences
Keywords:
Pubmed ID: 31991584
DOI: 10.3390/ijms21030772

Details

Common metabolic networks contribute to carbon sink strength of sorghum internodes: implications for bioenergy improvement.

Li Y, Tu M, Feng Y, Wang W, Messing J

Published: 14 December 2019 in Biotechnology for biofuels
Keywords:
Pubmed ID: 31832097
DOI: 10.1186/s13068-019-1612-7

Details

Interaction Between Induced and Natural Variation at oil yellow1 Delays Reproductive Maturity in Maize.

Khangura RS, Venkata BP, Marla SR, Mickelbart MV, Dhungana S, Braun DM, Dilkes BP, Johal GS

Published: 12 December 2019 in G3 (Bethesda, Md.)
Keywords:
Pubmed ID: 31822516
DOI: 10.1534/g3.119.400838

Details

Deterioration of ovary plays a key role in heat stress-induced spikelet sterility in sorghum.

Chiluwal A, Bheemanahalli R, Kanaganahalli V, Boyle D, Perumal R, Pokharel M, Oumarou H, Jagadish SVK

Published: 9 November 2019 in Plant, cell & environment
Keywords:
Pubmed ID: 31702833
DOI: 10.1111/pce.13673

Details

Sorghum MSD3 Encodes an ω-3 Fatty Acid Desaturase that Increases Grain Number by Reducing Jasmonic Acid Levels.

Dampanaboina L, Jiao Y, Chen J, Gladman N, Chopra R, Burow G, Hayes C, Christensen SA, Burke J, Ware D, Xin Z

Published: 31 October 2019 in International journal of molecular sciences
Keywords:
Pubmed ID: 31661847
DOI: 10.3390/ijms20215359

Details

Large-scale GWAS in sorghum reveals common genetic control of grain size among cereals.

Tao Y, Zhao X, Wang X, Hathorn A, Hunt C, Cruickshank AW, van Oosterom EJ, Godwin ID, Mace ES, Jordan DR

Published: 30 October 2019 in Plant biotechnology journal
Keywords:
Pubmed ID: 31659829
DOI: 10.1111/pbi.13284

Details

An Agrobacterium-delivered CRISPR/Cas9 system for targeted mutagenesis in sorghum.

Char SN, Wei J, Mu Q, Li X, Zhang ZJ, Yu J, Yang B

Published: 30 July 2019 in Plant biotechnology journal
Keywords:
Pubmed ID: 31374142
DOI: 10.1111/pbi.13229

Details

Transcriptome analysis reveals candidate genes related to phosphorus starvation tolerance in sorghum.

Zhang J, Jiang F, Shen Y, Zhan Q, Bai B, Chen W, Chi Y

Published: 13 July 2019 in BMC plant biology
Keywords:
Pubmed ID: 31296169
DOI: 10.1186/s12870-019-1914-8

Details

Genome-Wide Association Mapping of Anthracnose (Colletotrichum sublineolum) Resistance in NPGS Ethiopian Sorghum Germplasm.

Cuevas HE, Prom LK, Cruet-Burgos CM

Published: 11 July 2019 in G3 (Bethesda, Md.)
Keywords:
Pubmed ID: 31289022
DOI: 10.1534/g3.119.400350

Details

Response of Sorghum Enhanced in Monolignol Biosynthesis to Stalk Rot Pathogens.

Funnell-Harris DL, Sattler SE, O'Neill PM, Gries T, Tetreault HM, Clemente TE

Published: 20 June 2019 in Plant disease
Keywords:
Pubmed ID: 31215851
DOI: 10.1094/PDIS-09-18-1622-RE

Details

A Large-Scale Genome-Wide Association Analyses of Ethiopian Sorghum Landrace Collection Reveal Loci Associated With Important Traits.

Girma G, Nida H, Seyoum A, Mekonen M, Nega A, Lule D, Dessalegn K, Bekele A, Gebreyohannes A, Adeyanju A, Tirfessa A, Ayana G, Taddese T, Mekbib F, Belete K, Tesso T, Ejeta G, Mengiste T

Published: 14 June 2019 in Frontiers in plant science
Keywords:
Pubmed ID: 31191590
DOI: 10.3389/fpls.2019.00691

Details

New candidate loci and marker genes on chromosome 7 for improved chilling tolerance in sorghum.

Moghimi N, Desai JS, Bheemanahalli R, Impa SM, Vennapusa AR, Sebela D, Perumal R, Doherty CJ, Jagadish SVK

Published: 6 April 2019 in Journal of experimental botany
Keywords:
Pubmed ID: 30949711
DOI: 10.1093/jxb/erz143

Details

An Integrated Genotyping-by-Sequencing Polymorphism Map for Over 10,000 Sorghum Genotypes.

Hu Z, Olatoye MO, Marla S, Morris GP

Published: 6 April 2019 in The plant genome
Keywords:
Pubmed ID: 30951089
DOI: 10.3835/plantgenome2018.06.0044

Details

Global Responses of Resistant and Susceptible Sorghum (Sorghum bicolor) to Sugarcane Aphid (Melanaphis sacchari).

Tetreault HM, Grover S, Scully ED, Gries T, Palmer NA, Sarath G, Louis J, Sattler SE

Published: 12 March 2019 in Frontiers in plant science
Keywords:
Pubmed ID: 30853964
DOI: 10.3389/fpls.2019.00145

Details

Genome-scale identification, classification, and tissue specific expression analysis of late embryogenesis abundant (LEA) genes under abiotic stress conditions in Sorghum bicolor L.

Nagaraju M, Kumar SA, Reddy PS, Kumar A, Rao DM, Kavi Kishor PB

Published: 17 January 2019 in PloS one
Keywords:
Pubmed ID: 30650107
DOI: 10.1371/journal.pone.0209980

Details

Deleterious Mutation Burden and Its Association with Complex Traits in Sorghum (Sorghum bicolor).

Valluru R, Gazave EE, Fernandes SB, Ferguson JN, Lozano R, Hirannaiah P, Zuo T, Brown PJ, Leakey ADB, Gore MA, Buckler ES, Bandillo N

Published: 10 January 2019 in Genetics
Keywords:
Pubmed ID: 30622134
DOI: 10.1534/genetics.118.301742

Details

Systemic signaling contributes to the unfolded protein response of the plant endoplasmic reticulum.

Lai YS, Stefano G, Zemelis-Durfee S, Ruberti C, Gibbons L, Brandizzi F

Published: 27 September 2018 in Nature communications
Keywords:
Pubmed ID: 30254194
DOI: 10.1038/s41467-018-06289-9

Details

Association mapping by aerial drone reveals 213 genetic associations for Sorghum bicolor biomass traits under drought.

Spindel JE, Dahlberg J, Colgan M, Hollingsworth J, Sievert J, Staggenborg SH, Hutmacher R, Jansson C, Vogel JP

Published: 19 September 2018 in BMC genomics
Keywords:
Pubmed ID: 30223789
DOI: 10.1186/s12864-018-5055-5

Details

Modulating plant growth-metabolism coordination for sustainable agriculture.

Li S, Tian Y, Wu K, Ye Y, Yu J, Zhang J, Liu Q, Hu M, Li H, Tong Y, Harberd NP, Fu X

Published: 17 August 2018 in Nature
Keywords:
Pubmed ID: 30111841
DOI: 10.1038/s41586-018-0415-5

Details

Transcriptome and metabolome reveal distinct carbon allocation patterns during internode sugar accumulation in different sorghum genotypes.

Li Y, Wang W, Feng Y, Tu M, Wittich PE, Bate NJ, Messing J

Published: 28 July 2018 in Plant biotechnology journal
Keywords:
Pubmed ID: 30051585
DOI: 10.1111/pbi.12991

Details

Field-based high-throughput phenotyping of plant height in sorghum using different sensing technologies.

Wang X, Singh D, Marla S, Morris G, Poland J

Published: 13 July 2018 in Plant methods
Keywords:
Pubmed ID: 29997682
DOI: 10.1186/s13007-018-0324-5

Details

Engineering linear, branched-chain triterpene metabolism in monocots.

Kempinski C, Jiang Z, Zinck G, Sato SJ, Ge Z, Clemente TE, Chappell J

Published: 7 July 2018 in Plant biotechnology journal
Keywords:
Pubmed ID: 29979490
DOI: 10.1111/pbi.12983

Details

A new high-throughput assay for determining soluble sugar in sorghum internode-extracted juice.

Li Y, Mehta R, Messing J

Published: 28 June 2018 in Planta
Keywords:
Pubmed ID: 29948129
DOI: 10.1007/s00425-018-2932-8

Details

High-Polyphenol Sorghum Bran Extract Inhibits Cancer Cell Growth Through ROS Induction, Cell Cycle Arrest, and Apoptosis.

Smolensky D, Rhodes D, McVey DS, Fawver Z, Perumal R, Herald T, Noronha L

Published: 8 May 2018 in Journal of medicinal food
Keywords:
Pubmed ID: 29733262
DOI: 10.1089/jmf.2018.0008

Details

Population genomics of sorghum (Sorghum bicolor) across diverse agroclimatic zones of Niger.

Maina F, Bouchet S, Marla SR, Hu Z, Wang J, Mamadou A, Abdou M, Saïdou AA, Morris GP

Published: 13 February 2018 in Genome
Keywords:
Pubmed ID: 29432699
DOI: 10.1139/gen-2017-0131

Details

Whole-Genome Sequence Accuracy Is Improved by Replication in a Population of Mutagenized Sorghum.

Addo-Quaye C, Tuinstra M, Carraro N, Weil C, Dilkes BP

Published: 31 January 2018 in G3 (Bethesda, Md.)
Keywords:
Pubmed ID: 29378822
DOI: 10.1534/g3.117.300301

Details

Sorghum root-system classification in contrasting P environments reveals three main rooting types and root-architecture-related marker-trait associations.

Parra-Londono S, Kavka M, Samans B, Snowdon R, Wieckhorst S, Uptmoor R

Published: 20 January 2018 in Annals of botany
Keywords:
Pubmed ID: 29351588
DOI: 10.1093/aob/mcx157

Details

Genetic architecture of photosynthesis in Sorghum bicolor under non-stress and cold stress conditions.

Ortiz D, Hu J, Salas Fernandez MG

Published: 6 October 2017 in Journal of experimental botany
Keywords:
Pubmed ID: 28981780
DOI: 10.1093/jxb/erx276

Details

Development of a phenotyping platform for high throughput screening of nodal root angle in sorghum.

Joshi DC, Singh V, Hunt C, Mace E, van Oosterom E, Sulman R, Jordan D, Hammer G

Published: 14 July 2017 in Plant methods
Keywords:
Pubmed ID: 28702072
DOI: 10.1186/s13007-017-0206-2

Details

Validation of QTL mapping and transcriptome profiling for identification of candidate genes associated with nitrogen stress tolerance in sorghum.

Gelli M, Konda AR, Liu K, Zhang C, Clemente TE, Holding DR, Dweikat IM

Published: 13 July 2017 in BMC plant biology
Keywords:
Pubmed ID: 28697783
DOI: 10.1186/s12870-017-1064-9

Details

Dynamics of gene expression during development and expansion of vegetative stem internodes of bioenergy sorghum.

Kebrom TH, McKinley B, Mullet JE

Published: 27 June 2017 in Biotechnology for biofuels
Keywords:
Pubmed ID: 28649278
DOI: 10.1186/s13068-017-0848-3

Details

Expression of the Maize Dof1 Transcription Factor in Wheat and Sorghum.

Peña PA, Quach T, Sato S, Ge Z, Nersesian N, Changa T, Dweikat I, Soundararajan M, Clemente TE

Published: 21 April 2017 in Frontiers in plant science
Keywords:
Pubmed ID: 28424717
DOI: 10.3389/fpls.2017.00434

Details

Salmon provides fast and bias-aware quantification of transcript expression.

Patro R, Duggal G, Love MI, Irizarry RA, Kingsford C

Published: 7 March 2017 in Nature methods
Keywords:
Pubmed ID: 28699261
DOI: 10.1038/nmeth.4197

Details

Genetic architecture of kernel composition in global sorghum germplasm.

Rhodes DH, Hoffmann L, Rooney WL, Herald TJ, Bean S, Boyles R, Brenton ZW, Kresovich S

Published: 7 January 2017 in BMC genomics
Keywords:
Pubmed ID: 28056770
DOI: 10.1186/s12864-016-3403-x

Details

Forward Genetics by Sequencing EMS Variation-Induced Inbred Lines.

Addo-Quaye C, Buescher E, Best N, Chaikam V, Baxter I, Dilkes BP

Published: 4 January 2017 in G3 (Bethesda, Md.)
Keywords:
Pubmed ID: 28040779
DOI: 10.1534/g3.116.029660

Details

Transcriptomic analysis comparing stay-green and senescent Sorghum bicolor lines identifies a role for proline biosynthesis in the stay-green trait.

Johnson SM, Cummins I, Lim FL, Slabas AR, Knight MR

Published: 1 September 2015 in Journal of experimental botany
Keywords:
Pubmed ID: 26320239
DOI: 10.1093/jxb/erv405

Details

Identification of novel drought-responsive microRNAs and trans-acting siRNAs from Sorghum bicolor (L.) Moench by high-throughput sequencing analysis.

Katiyar A, Smita S, Muthusamy SK, Chinnusamy V, Pandey DM, Bansal KC

Published: 4 August 2015 in Frontiers in plant science
Keywords:
Pubmed ID: 26236318
DOI: 10.3389/fpls.2015.00506

Details

Tobacco drought stress responses reveal new targets for Solanaceae crop improvement.

Rabara RC, Tripathi P, Reese RN, Rushton DL, Alexander D, Timko MP, Shen QJ, Rushton PJ

Published: 1 July 2015 in BMC genomics
Keywords:
Pubmed ID: 26123791
DOI: 10.1186/s12864-015-1575-4

Details

MOROKOSHI: transcriptome database in Sorghum bicolor.

Makita Y, Shimada S, Kawashima M, Kondou-Kuriyama T, Toyoda T, Matsui M

Published: 17 December 2014 in Plant & cell physiology
Keywords:
Pubmed ID: 25505007
DOI: 10.1093/pcp/pcu187

Details

Arabidopsis drought-induced protein Di19-3 participates in plant response to drought and high salinity stresses.

Qin LX, Li Y, Li DD, Xu WL, Zheng Y, Li XB

Published: 15 September 2014 in Plant molecular biology
Keywords:
Pubmed ID: 25516281
DOI: 10.1007/s11103-014-0251-4

Details